STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MST6Os07g0559700 protein; Putative monosaccharide transporter 3; Mediates active uptake of hexoses by sugar:proton symport (Probable). Can transport glucose, fructose, mannose, galactose, xylose and ribose (530 aa)    
Predicted Functional Partners:
FLO6
Isoamylase n-terminal domain containing protein, expressed; Involved in compound starch granule formation and starch synthesis in endosperm. May act as a regulatory scaffolding protein and affect starch synthesis and compound starch granule formation through direct interaction with isoamylase 1 (ISA1). Binds starch, amylopectin and amylose through its C-terminal carbohydrate-binding domain (CBM) in vitro
    
 
 0.671
SSIII-1
Os04g0624600 protein; Soluble starch synthase III-1
      
 0.658
OsJ_06044
Os02g0242600 protein; Glutelin
      
 0.654
P0676G05.9
Os05g0156900 protein; Putative H+-pyrophosphatase; cDNA clone:002-126-A04, full insert sequence
   
  
 0.640
OS04T0167800-01
OSJNBb0089K06.1 protein; OSJNBb0115I21.2 protein; Os04g0167800 protein
      
 0.637
SSIIIA
Soluble starch synthase 3a, chloroplastic/amyloplastic; Involved in starch synthesis in endosperm amyloplasts Plays an important role in the elongation of amylopectin B chains
      
 0.618
OS03T0826300-00
Oryza sativa Japonica Group mRNA
      
 0.614
OS10T0114300-01
NADH-dependent oxidoreductase 2, putative, expressed; Os10g0114300 protein; Putative NADPH-dependent oxidoreductase; cDNA clone:001-113-H10, full insert sequence
      
 0.603
SSII-2
Soluble starch synthase 2-2, chloroplastic/amyloplastic; May contribute to the deposition of transient starch in chloroplasts of leaves; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily
      
 0.588
OsJ_30954
Histone-like transcription factor and archaeal histone family protein, expressed; Os10g0191900 protein; Putative transcription binding factor
   
  
 0.582
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa L., red rice, rice
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