Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| 4CLL3 | COA1 | OS08T0143300-00 | OS06T0165800-01 | 4-coumarate--CoA ligase-like 3 | Caffeoyl-CoA O-methyltransferase; Os06g0165800 protein; Putative caffeoyl-CoA O-methyltransferase | 0.980 |
| 4CLL3 | OS01T0688200-01 | OS08T0143300-00 | OS01T0688200-01 | 4-coumarate--CoA ligase-like 3 | Os01g0688200 protein | 0.979 |
| 4CLL3 | OS01T0820000-00 | OS08T0143300-00 | OS01T0820000-00 | 4-coumarate--CoA ligase-like 3 | annotation not available | 0.979 |
| 4CLL3 | OS02T0180700-01 | OS08T0143300-00 | OS02T0180700-01 | 4-coumarate--CoA ligase-like 3 | Os02g0180700 protein; Putative cinnamoyl-CoA reductase; cDNA clone:J023064M01, full insert sequence | 0.984 |
| 4CLL3 | OS02T0207900-01 | OS08T0143300-00 | OS02T0207900-01 | 4-coumarate--CoA ligase-like 3 | Os02g0207900 protein | 0.979 |
| 4CLL3 | OS09T0127300-01 | OS08T0143300-00 | OS09T0127300-01 | 4-coumarate--CoA ligase-like 3 | Os09g0127300 protein; Putative cinnamoyl-CoA reductase; cDNA clone:J023051O20, full insert sequence | 0.990 |
| 4CLL3 | OsJ_07593 | OS08T0143300-00 | OS02T0626400-01 | 4-coumarate--CoA ligase-like 3 | Phenylalanine ammonia-lyase | 0.983 |
| 4CLL3 | OsJ_30647 | OS08T0143300-00 | OS10T0135600-01 | 4-coumarate--CoA ligase-like 3 | Hydrolase, alpha/beta fold family protein, putative, expressed; Os10g0135600 protein; cDNA clone:J013090G24, full insert sequence; cDNA clone:J013091N22, full insert sequence | 0.979 |
| 4CLL3 | P0710A02.8 | OS08T0143300-00 | OS01T0591300-01 | 4-coumarate--CoA ligase-like 3 | Os01g0591300 protein; Putative cytosolic aldehyde dehydrogenase RF2D | 0.986 |
| 4CLL3 | PAL | OS08T0143300-00 | OS02T0626100-01 | 4-coumarate--CoA ligase-like 3 | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton | 0.987 |
| COA1 | 4CLL3 | OS06T0165800-01 | OS08T0143300-00 | Caffeoyl-CoA O-methyltransferase; Os06g0165800 protein; Putative caffeoyl-CoA O-methyltransferase | 4-coumarate--CoA ligase-like 3 | 0.980 |
| COA1 | OS01T0820000-00 | OS06T0165800-01 | OS01T0820000-00 | Caffeoyl-CoA O-methyltransferase; Os06g0165800 protein; Putative caffeoyl-CoA O-methyltransferase | annotation not available | 0.542 |
| COA1 | OS02T0180700-01 | OS06T0165800-01 | OS02T0180700-01 | Caffeoyl-CoA O-methyltransferase; Os06g0165800 protein; Putative caffeoyl-CoA O-methyltransferase | Os02g0180700 protein; Putative cinnamoyl-CoA reductase; cDNA clone:J023064M01, full insert sequence | 0.981 |
| COA1 | OS09T0127300-01 | OS06T0165800-01 | OS09T0127300-01 | Caffeoyl-CoA O-methyltransferase; Os06g0165800 protein; Putative caffeoyl-CoA O-methyltransferase | Os09g0127300 protein; Putative cinnamoyl-CoA reductase; cDNA clone:J023051O20, full insert sequence | 0.986 |
| COA1 | OsJ_07593 | OS06T0165800-01 | OS02T0626400-01 | Caffeoyl-CoA O-methyltransferase; Os06g0165800 protein; Putative caffeoyl-CoA O-methyltransferase | Phenylalanine ammonia-lyase | 0.768 |
| COA1 | PAL | OS06T0165800-01 | OS02T0626100-01 | Caffeoyl-CoA O-methyltransferase; Os06g0165800 protein; Putative caffeoyl-CoA O-methyltransferase | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton | 0.745 |
| OS01T0688200-01 | 4CLL3 | OS01T0688200-01 | OS08T0143300-00 | Os01g0688200 protein | 4-coumarate--CoA ligase-like 3 | 0.979 |
| OS01T0688200-01 | OS01T0820000-00 | OS01T0688200-01 | OS01T0820000-00 | Os01g0688200 protein | annotation not available | 0.543 |
| OS01T0688200-01 | OsJ_30647 | OS01T0688200-01 | OS10T0135600-01 | Os01g0688200 protein | Hydrolase, alpha/beta fold family protein, putative, expressed; Os10g0135600 protein; cDNA clone:J013090G24, full insert sequence; cDNA clone:J013091N22, full insert sequence | 0.848 |
| OS01T0820000-00 | 4CLL3 | OS01T0820000-00 | OS08T0143300-00 | annotation not available | 4-coumarate--CoA ligase-like 3 | 0.979 |
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