STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UGE-2UDP-glucose 4-epimerase 2; Catalyzes the interconversion between UDP-glucose and UDP-galactose; Belongs to the NAD(P)-dependent epimerase/dehydratase family (408 aa)    
Predicted Functional Partners:
OS07T0171200-01
Os07g0171200 protein; Galactose-1-phosphate uridylyltransferase-like; Os07g0171200 protein
  
 0.999
OS02T0117700-01
Os02g0117700 protein; UDP-glucose pyrophosphorylase; cDNA clone:J023088D10, full insert sequence
  
 
 0.997
USP
UDP-sugar pyrophosphorylase; May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars (By similarity)
  
 
 0.993
UGP
Os09g0553200 protein; UDP-glucose pyrophosphorylase; cDNA clone:001-034-B12, full insert sequence; cDNA clone:001-041-C12, full insert sequence; cDNA clone:J013039M01, full insert sequence
  
 
 0.991
OS05T0387200-01
cDNA clone:J013002O14, full insert sequence; Os05g0387200 protein; Putative UDP-sulfoquinovose synthase; cDNA clone:J013002O14, full insert sequence
     
 0.990
OS01T0264100-00
annotation not available
  
 
 0.987
OS03T0316200-01
Hexosyltransferase; Galactinol synthase 3, putative, expressed; Os03g0316200 protein; cDNA clone:J023113D08, full insert sequence ; Belongs to the glycosyltransferase 8 family
     
 0.987
OsJ_10344
Os03g0278200 protein; Rhamnose biosynthetic enzyme 1, putative, expressed
  
 
0.986
UGE-3
UDP-glucose 4-epimerase 3; Catalyzes the interconversion between UDP-glucose and UDP-galactose; Belongs to the NAD(P)-dependent epimerase/dehydratase family
  
 
0.986
GME-1
GDP-mannose 3,5-epimerase 1; Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose
  
0.986
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa L., red rice, rice
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