STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLU15Endoglucanase 20 ; Belongs to the glycosyl hydrolase 9 (cellulase E) family (516 aa)    
Predicted Functional Partners:
OS06T0663600-01
Endonuclease V protein-like; Os06g0663600 protein; cDNA clone:J023120P09, full insert sequence
      
 0.792
OS07T0679300-01
Alpha-galactosidase; Os07g0679300 protein; Putative alpha-galactosidase; cDNA clone:J013093O17, full insert sequence
      
 0.753
HSP23.2
23.2 kDa heat shock protein
      
 0.747
OsJ_00571
Os01g0174500 protein; Prolyl 4-hydroxylase-like; Uncharacterized protein
      
 0.611
OS03T0761900-01
Os03g0761900 protein; Prolyl 4-hydroxylase, putative, expressed; Putative dioxygenase; Putative hydroxylase subunit
      
 0.611
OsJ_13003
Os03g0803500 protein; Oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed; Putative oxidoreductase; cDNA clone:006-203-E11, full insert sequence
      
 0.611
OsJ_14349
OSJNBb0085H11.11 protein; Os04g0346000 protein; cDNA clone:002-113-D10, full insert sequence
      
 0.611
OS07T0194500-01
Os07g0194500 protein; cDNA clone:J033098K22, full insert sequence
      
 0.611
OsJ_31503
cDNA clone:006-311-A08, full insert sequence; Os10g0413500 protein; Prolyl 4-hydroxylase, putative, expressed; cDNA clone:006-311-A08, full insert sequence
      
 0.611
OS10T0497800-01
Os10g0497800 protein; Prolyl 4-hydroxylase alpha subunit, putative, expressed; cDNA clone:J013136I05, full insert sequence
      
 0.611
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa L., red rice, rice
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