STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g79646Predicted protein. (117 aa)    
Predicted Functional Partners:
v1g165384
Predicted protein.
   
 0.745
v1g186750
Predicted protein.
   
 0.667
v1g245421
Predicted protein.
   
 0.657
v1g238290
Predicted protein.
   
 0.655
v1g218593
Predicted protein.
    
 0.647
v1g164776
Predicted protein; Belongs to the DEAD box helicase family.
    
 0.646
v1g247177
Small nuclear ribonucleoprotein Sm D2.
   
 0.644
v1g86522
Small nuclear ribonucleoprotein Sm D3.
   
 0.640
v1g238540
Small nuclear ribonucleoprotein G.
   
 0.620
v1g187696
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.586
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.