STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g178268Predicted protein; Belongs to the calmodulin family. (152 aa)    
Predicted Functional Partners:
v1g209174
Predicted protein; Belongs to the MAGUK family.
    
 0.600
v1g5371
Predicted protein; Belongs to the actin family.
    
 0.532
v1g224061
Predicted protein.
    
 0.519
v1g74684
Predicted protein.
  
     0.505
v1g222653
Predicted protein.
  
  0.500
v1g91090
Predicted protein.
  
 
 
 0.499
v1g245588
Serine/threonine-protein phosphatase.
    
 0.483
v1g116517
Predicted protein.
   
 0.477
v1g40956
Predicted protein.
   
 0.434
v1g118527
Predicted protein.
   
 0.434
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.