STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g234171Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (268 aa)    
Predicted Functional Partners:
v1g246414
Predicted protein; Belongs to the acid ceramidase family.
     
 0.957
v1g79235
Predicted protein.
    
 0.948
v1g243542
Predicted protein.
    
 0.948
v1g174147
Predicted protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
   
 
 0.938
v1g193358
Predicted protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
   
 
 0.938
v1g239044
Predicted protein.
    
 0.936
v1g105071
Predicted protein.
    
 0.936
v1g128774
Predicted protein.
     
 0.935
v1g163601
Predicted protein.
     
 0.921
v1g207364
Predicted protein.
     
 0.915
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.