STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g160432Malate synthase; Belongs to the malate synthase family. (530 aa)    
Predicted Functional Partners:
v1g179675
Predicted protein.
 
 
 0.985
v1g244414
Predicted protein.
     
 0.841
v1g82156
Citrate synthase; Belongs to the citrate synthase family.
  
 0.792
v1g157608
Citrate synthase; Belongs to the citrate synthase family.
  
 0.792
v1g179073
Predicted protein.
   
 0.785
v1g151042
Predicted protein.
   
  
 0.783
v1g202059
Predicted protein.
     
 0.766
v1g107098
Predicted protein.
  
 
0.752
v1g189422
Predicted protein.
   
 
 0.729
v1g113343
Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.685
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.