STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g241323Predicted protein. (438 aa)    
Predicted Functional Partners:
v1g236625
Predicted protein; Belongs to the DEAD box helicase family.
   
 0.977
v1g193215
Predicted protein.
   
 0.835
v1g196099
Predicted protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.828
v1g224820
Predicted protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.828
v1g167764
Nuclear cap-binding protein subunit 2.
    
 0.808
v1g230864
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.808
v1g5820
Predicted protein.
   
 0.808
v1g148833
Predicted protein.
   
 0.781
v1g99103
Predicted protein.
   
 0.758
v1g58243
Predicted protein.
   
 0.754
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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