STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g186132Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (407 aa)    
Predicted Functional Partners:
v1g207217
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.998
v1g120351
Predicted protein.
    
 0.974
v1g238754
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.939
v1g228742
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
 0.914
v1g190553
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.802
v1g5010
Predicted protein.
 
  
 0.793
v1g169033
Predicted protein.
  
  
 0.721
v1g204353
Predicted protein.
  
  
 0.687
v1g164036
Predicted protein.
  
  
 0.684
v1g171543
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.681
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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