STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g20650Predicted protein. (380 aa)    
Predicted Functional Partners:
v1g157648
Predicted protein.
    
 0.633
v1g243867
Predicted protein.
    
 0.590
v1g195312
Predicted protein.
   
 0.556
v1g235633
Predicted protein.
    
 0.499
v1g244447
Predicted protein.
    
 0.480
v1g115110
Predicted protein.
   
 0.472
v1g165676
Predicted protein.
   
 0.451
v1g158808
Predicted protein.
    
 0.448
v1g238789
Predicted protein.
    
 0.435
v1g243415
Predicted protein.
    
 0.435
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.