STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g111422Predicted protein. (394 aa)    
Predicted Functional Partners:
v1g184544
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.923
v1g238755
Vacuolar fusion protein CCZ1 homolog; Belongs to the CCZ1 family.
    
 0.875
v1g222174
Predicted protein.
    
 0.875
v1g145491
Predicted protein.
    
 0.875
v1g181611
Predicted protein.
    
 0.862
v1g237807
Predicted protein.
    
 0.804
v1g191733
Predicted protein.
    
 0.804
v1g207834
Predicted protein.
 
      0.786
v1g235773
Predicted protein.
   
 
 0.712
v1g183590
Predicted protein.
    
 
 0.682
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.