STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g227021Predicted protein. (220 aa)    
Predicted Functional Partners:
v1g100066
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.948
v1g245730
Predicted protein.
    
 0.919
v1g120850
Predicted protein; Belongs to the protein kinase superfamily.
    
 0.919
v1g241947
Predicted protein.
   
 0.901
v1g241948
Predicted protein.
   
 0.901
v1g238618
Predicted protein.
    
 0.818
v1g192352
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.800
v1g186153
Predicted protein.
      
 0.639
v1g185991
Predicted protein.
    
 
 0.620
v1g97113
Predicted protein.
 
  
 0.581
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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