STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g245188Predicted protein. (471 aa)    
Predicted Functional Partners:
v1g94818
Predicted protein.
   
 0.482
v1g29690
Predicted protein.
   
 0.482
v1g116588
Predicted protein.
   
 0.482
v1g233007
Predicted protein.
    
 0.449
v1g88429
Predicted protein.
   
 0.411
v1g103523
Predicted protein.
   
 0.411
v1g218118
Predicted protein.
   
 0.411
v1g148857
Predicted protein.
   
 0.411
v1g66793
Predicted protein.
    
 0.404
v1g78379
Predicted protein.
    
 0.404
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.