STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g121754Predicted protein. (130 aa)    
Predicted Functional Partners:
Twist
Twist family bHLH transcription factor.
   
 
 0.641
v1g6429
Predicted protein.
   
 0.629
v1g97005
Predicted protein.
   
  
 0.619
v1g241362
Predicted protein.
    
 
 0.600
v1g90956
Predicted protein.
    
 0.567
v1g196609
Predicted protein.
    
 0.492
v1g235335
Predicted protein.
   
 0.445
v1g115913
Predicted protein.
   
 0.445
v1g242106
Predicted protein.
    
 0.442
v1g106064
Predicted protein.
    
 0.442
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.