STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g17445Predicted protein. (139 aa)    
Predicted Functional Partners:
v1g233147
Predicted protein.
   
 0.998
v1g142315
Predicted protein.
   
 0.980
v1g165839
Predicted protein.
   
 0.978
v1g1818
Predicted protein.
   
 0.978
v1g135138
Predicted protein.
    
 0.977
v1g242522
Predicted protein.
    
 0.960
v1g115118
Predicted protein.
   
 0.960
v1g115316
Predicted protein.
   
 0.960
v1g74441
Predicted protein.
   
 0.960
v1g160160
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.946
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.