STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g172894Predicted protein. (340 aa)    
Predicted Functional Partners:
v1g141685
Predicted protein.
   
 
 0.927
v1g229384
Xylose isomerase.
    
 0.924
v1g138093
Galactose-1-phosphate uridylyltransferase.
   
 
 0.671
v1g145157
Predicted protein.
     
 0.652
v1g197607
Predicted protein.
  
 
 0.636
v1g124869
Predicted protein.
  
 
 0.636
v1g6609
Predicted protein.
  
 
 0.636
v1g171813
Predicted protein.
   
  
 0.629
v1g164483
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
  
  
 0.622
v1g152188
Predicted protein; Belongs to the TrpA family.
     
 0.621
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.