STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g129116Predicted protein. (58 aa)    
Predicted Functional Partners:
v1g167553
Predicted protein.
   
 0.442
v1g244319
Predicted protein.
   
 0.442
v1g189251
Predicted protein.
   
 0.442
v1g172175
Predicted protein.
   
 0.442
v1g244850
Predicted protein.
   
 
 0.430
v1g9756
Predicted protein.
   
 
 0.430
v1g169376
Predicted protein.
      
 0.410
v1g114579
Predicted protein.
      
 0.410
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.