STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g235881Predicted protein; Belongs to the glycosyltransferase 47 family. (881 aa)    
Predicted Functional Partners:
v1g85640
Predicted protein.
      
 0.639
v1g240106
Hexosyltransferase.
      
 0.639
v1g98166
Predicted protein.
      
 0.639
v1g237290
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.639
v1g199897
Predicted protein.
      
 0.638
v1g243307
Predicted protein.
      
 0.638
v1g118618
Predicted protein.
      
 0.638
v1g94211
Hexosyltransferase.
      
 0.635
v1g164114
Predicted protein; Belongs to the glycosyltransferase 23 family.
      
 0.621
v1g82559
Predicted protein.
      
 0.612
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.