STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g134213Predicted protein. (174 aa)    
Predicted Functional Partners:
v1g236108
Predicted protein.
    
   0.757
v1g196829
Predicted protein; Belongs to the AAA ATPase family.
    
   0.752
v1g238636
Proteasome subunit alpha type.
    
   0.752
v1g240213
Predicted protein; Belongs to the BI1 family.
    
   0.752
v1g204128
Predicted protein.
    
   0.752
v1g99390
Proteasome subunit beta.
    
   0.752
v1g168163
Proteasome subunit alpha type.
    
   0.752
v1g244951
Predicted protein; Belongs to the AAA ATPase family.
   
   0.752
v1g190193
Predicted protein.
    
   0.752
v1g191787
Proteasome subunit beta.
    
   0.752
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.