STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g225988Predicted protein. (213 aa)    
Predicted Functional Partners:
v1g216004
Predicted protein.
   
 
 0.912
v1g21829
Predicted protein.
   
 
 0.580
v1g163667
Predicted protein.
      
 0.433
v1g165341
Predicted protein.
      
 0.422
v1g222608
Predicted protein.
      
 0.422
v1g104656
Predicted protein.
   
  
 0.413
v1g183236
Predicted protein.
   
  
 0.407
v1g172497
Predicted protein.
   
  
 0.407
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, starlet sea anemone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.