STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
v1g177835Predicted protein; Belongs to the complex I LYR family (89 aa)    
Predicted Functional Partners:
v1g181047
Predicted protein
   
 
 0.793
v1g236403
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis
   
 
 0.789
v1g185873
Predicted protein; Belongs to the complex I LYR family
   
  
 0.764
v1g206387
Predicted protein; Belongs to the complex I LYR family
    
 
 0.629
v1g247745
Predicted protein; Belongs to the complex I LYR family
   
 
 0.618
acn9
Succinate dehydrogenase assembly factor 3, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Promotes maturation of the iron-sulfur protein subunit of the SDH catalytic dimer, protecting it from the deleterious effects of oxidants. May act together with SDHAF1
   
  
 0.577
v1g98950
Predicted protein
      
 0.568
v1g174585
Predicted protein
    
 
 0.502
v1g109316
Predicted protein
      
 0.493
v1g41194
Predicted protein
   
  
 0.487
Your Current Organism:
Nematostella vectensis
NCBI taxonomy Id: 45351
Other names: N. vectensis, Nematostella vectensis, starlet sea anemone
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