node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Igni_0183 | rpl13 | Igni_0183 | Igni_0185 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
Igni_0183 | rpl18e | Igni_0183 | Igni_0184 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | PFAM: ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.996 |
Igni_0183 | rps10 | Igni_0183 | Igni_0065 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.997 |
Igni_0183 | rps11 | Igni_0183 | Igni_0182 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
Igni_0183 | rps12 | Igni_0183 | Igni_0247 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.996 |
Igni_0183 | rps13 | Igni_0183 | Igni_0180 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
Igni_0183 | rps2 | Igni_0183 | Igni_0188 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
Igni_0183 | rps4 | Igni_0183 | Igni_0181 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
Igni_0183 | rps9 | Igni_0183 | Igni_0186 | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
Igni_0193 | rpl13 | Igni_0193 | Igni_0185 | SSU ribosomal protein S25E. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.993 |
Igni_0193 | rpl18e | Igni_0193 | Igni_0184 | SSU ribosomal protein S25E. | PFAM: ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.997 |
Igni_0193 | rps10 | Igni_0193 | Igni_0065 | SSU ribosomal protein S25E. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
Igni_0193 | rps11 | Igni_0193 | Igni_0182 | SSU ribosomal protein S25E. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
Igni_0193 | rps12 | Igni_0193 | Igni_0247 | SSU ribosomal protein S25E. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.998 |
Igni_0193 | rps13 | Igni_0193 | Igni_0180 | SSU ribosomal protein S25E. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
Igni_0193 | rps2 | Igni_0193 | Igni_0188 | SSU ribosomal protein S25E. | PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
Igni_0193 | rps4 | Igni_0193 | Igni_0181 | SSU ribosomal protein S25E. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
Igni_0193 | rps9 | Igni_0193 | Igni_0186 | SSU ribosomal protein S25E. | PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rpl13 | Igni_0183 | Igni_0185 | Igni_0183 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: RNA polymerase, dimerisation; RNA polymerase, insert; SMART: RNA polymerase, RpoA/D/Rpb3-type. | 0.998 |
rpl13 | Igni_0193 | Igni_0185 | Igni_0193 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S25E. | 0.993 |