Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Igni_0557 | Igni_0558 | Igni_0557 | Igni_0558 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Igni_0557 | Igni_0559 | Igni_0557 | Igni_0559 | Hypothetical protein. | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | 0.784 |
Igni_0557 | Igni_0561 | Igni_0557 | Igni_0561 | Hypothetical protein. | SMART: WD-40 repeat protein. | 0.545 |
Igni_0557 | hisI | Igni_0557 | Igni_0562 | Hypothetical protein. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.547 |
Igni_0557 | thi4 | Igni_0557 | Igni_0560 | Hypothetical protein. | Thiazole biosynthesis enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur. | 0.773 |
Igni_0558 | Igni_0557 | Igni_0558 | Igni_0557 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Igni_0558 | Igni_0559 | Igni_0558 | Igni_0559 | Hypothetical protein. | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | 0.773 |
Igni_0558 | Igni_0561 | Igni_0558 | Igni_0561 | Hypothetical protein. | SMART: WD-40 repeat protein. | 0.541 |
Igni_0558 | hisI | Igni_0558 | Igni_0562 | Hypothetical protein. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.541 |
Igni_0558 | thi4 | Igni_0558 | Igni_0560 | Hypothetical protein. | Thiazole biosynthesis enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur. | 0.773 |
Igni_0559 | Igni_0557 | Igni_0559 | Igni_0557 | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | Hypothetical protein. | 0.784 |
Igni_0559 | Igni_0558 | Igni_0559 | Igni_0558 | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | Hypothetical protein. | 0.773 |
Igni_0559 | Igni_0561 | Igni_0559 | Igni_0561 | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | SMART: WD-40 repeat protein. | 0.552 |
Igni_0559 | hisI | Igni_0559 | Igni_0562 | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.628 |
Igni_0559 | thi4 | Igni_0559 | Igni_0560 | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | Thiazole biosynthesis enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur. | 0.773 |
Igni_0561 | Igni_0557 | Igni_0561 | Igni_0557 | SMART: WD-40 repeat protein. | Hypothetical protein. | 0.545 |
Igni_0561 | Igni_0558 | Igni_0561 | Igni_0558 | SMART: WD-40 repeat protein. | Hypothetical protein. | 0.541 |
Igni_0561 | Igni_0559 | Igni_0561 | Igni_0559 | SMART: WD-40 repeat protein. | Competence/damage-inducible protein cinA; PFAM: molybdopterin binding domain. | 0.552 |
Igni_0561 | hisI | Igni_0561 | Igni_0562 | SMART: WD-40 repeat protein. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.805 |
Igni_0561 | thi4 | Igni_0561 | Igni_0560 | SMART: WD-40 repeat protein. | Thiazole biosynthesis enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur. | 0.541 |
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