STRINGSTRING
ONIVA03G40610.1 protein (Oryza nivara) - STRING interaction network
"ONIVA03G40610.1" - annotation not available in Oryza nivara
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONIVA03G40610.1annotation not available (434 aa)    
Predicted Functional Partners:
ONIVA01G11600.1
annotation not available (176 aa)
           
  0.842
ONIVA01G16080.1
annotation not available (599 aa)
           
  0.739
ONIVA07G25390.1
annotation not available (318 aa)
           
  0.694
ONIVA01G06100.2
annotation not available (2973 aa)
           
  0.686
ONIVA03G06500.1
annotation not available (530 aa)
           
  0.677
ONIVA06G20120.1
annotation not available (502 aa)
           
  0.644
ONIVA04G27330.1
annotation not available (478 aa)
           
  0.644
ONIVA09G08220.1
annotation not available (532 aa)
       
      0.598
ONIVA08G16390.1
annotation not available (464 aa)
       
      0.598
ONIVA01G51030.3
annotation not available (168 aa)
       
      0.598
Your Current Organism:
Oryza nivara
NCBI taxonomy Id: 4536
Other names: O. nivara, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea, Oryza sativa f. spontanea Roshev. nom. illeg.
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