STRINGSTRING
ORGLA04G0074500.1 protein (Oryza glaberrima) - STRING interaction network
"ORGLA04G0074500.1" - Uncharacterized protein in Oryza glaberrima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORGLA04G0074500.1Uncharacterized protein (212 aa)    
Predicted Functional Partners:
ORGLA08G0028800.1
Uncharacterized protein (290 aa)
           
  0.658
ORGLA01G0349100.1
Uncharacterized protein (667 aa)
           
  0.658
ORGLA12G0033700.1
Uncharacterized protein (277 aa)
           
  0.654
ORGLA12G0150600.1
Uncharacterized protein (366 aa)
           
  0.622
ORGLA12G0150300.1
Uncharacterized protein (354 aa)
           
  0.622
ORGLA02G0195900.1
Uncharacterized protein (1053 aa)
           
  0.507
ORGLA03G0130500.1
Uncharacterized protein (391 aa)
           
  0.406
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima, Oryza glaberrima Steud.
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