STRINGSTRING
ORGLA09G0093800.1 protein (Oryza glaberrima) - STRING interaction network
"ORGLA09G0093800.1" - Uncharacterized protein in Oryza glaberrima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORGLA09G0093800.1Uncharacterized protein (438 aa)    
Predicted Functional Partners:
ORGLA02G0051600.1
Uncharacterized protein (428 aa)
           
  0.646
ORGLA06G0070100.1
Uncharacterized protein (258 aa)
       
    0.603
ORGLA08G0181700.1
Uncharacterized protein; Belongs to the OSBP family (391 aa)
           
  0.580
ORGLA03G0079000.1
Uncharacterized protein (316 aa)
     
   
  0.476
ORGLA11G0076600.1
Uncharacterized protein (148 aa)
           
  0.476
ORGLA05G0216800.1
Uncharacterized protein (371 aa)
           
  0.476
ORGLA07G0005100.1
Uncharacterized protein (349 aa)
           
  0.437
ORGLA03G0314500.1
Uncharacterized protein (347 aa)
           
  0.437
ORGLA02G0291900.1
Uncharacterized protein (185 aa)
           
  0.422
ORGLA10G0080300.1
Uncharacterized protein (356 aa)
           
  0.408
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima, Oryza glaberrima Steud.
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