STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6PHR4THO complex subunit 4A-like isoform X1. (229 aa)    
Predicted Functional Partners:
A0A3L6R6Z4
DEAD-box ATP-dependent RNA helicase 15-like.
   
 0.985
A0A3L6REC6
DEAD-box ATP-dependent RNA helicase 15 isoform X2.
   
 0.982
A0A3L6SYI1
DEAD-box ATP-dependent RNA helicase 15 isoform X1.
   
 0.982
A0A3L6RHE5
THO complex subunit 2.
   
 0.974
A0A3L6RJW1
RRM domain-containing protein.
  
 
 
0.974
A0A3L6SSD4
THO complex subunit 2.
   
 0.974
A0A3L6QI86
THO complex subunit 5A isoform X2.
   
 0.960
A0A3L6RST7
THO complex subunit 5A isoform X2.
   
 0.960
A0A3L6QU51
THO complex subunit 3.
   
 0.951
A0A3L6TDX6
THO complex subunit 3.
   
 0.951
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.