STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6T2S1Retrotransposon protein, putative, unclassified. (117 aa)    
Predicted Functional Partners:
A0A3L6SHH1
dUTPase domain-containing protein.
    
  0.541
A0A3L6SU43
Nicotinamide adenine dinucleotide transporter 1, chloroplastic; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.541
A0A3L6TS08
Deoxyuridine 5.
    
  0.541
A0A3L6PM66
Uncharacterized protein.
    
  0.528
A0A3L6Q120
Uncharacterized protein.
    
  0.528
A0A3L6P9B1
DNA repair endonuclease UVH1.
    
  0.527
A0A3L6SFX4
ERCC4 domain-containing protein.
    
  0.527
A0A3L6PA21
RPA_C domain-containing protein.
    
  0.467
A0A3L6QJ03
RPA_C domain-containing protein.
    
  0.467
A0A3L6QJB4
Replication protein A 32 kDa subunit B-like.
    
  0.467
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.