STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK20116.1Outer membrane cobalamin receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; JGI identifier:CP488_02750. (651 aa)    
Predicted Functional Partners:
CEK16736.1
TonB family protein; PFAM: Gram-negative bacterial TonB protein C-terminal; TIGRFAM: TonB family C-terminal domain; JGI identifier:CP488_01609.
 
 
 0.644
CEK12450.1
PFAM: Outer membrane efflux protein; JGI identifier:CP488_00030.
  
   
 0.637
CEK14519.1
Beta-propeller domain-containing protein, methanol dehydrogenase; PFAM: NHL repeat; JGI identifier:CP488_00864.
  
 
 0.616
CEK14525.1
Gluconolactonase; PFAM: NHL repeat; JGI identifier:CP488_00866.
  
 
 0.616
CEK16729.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family; JGI identifier:CP488_01607.
 
  
 0.616
CEK16733.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1); PFAM: Biopolymer transport protein ExbD/TolR; JGI identifier:CP488_01608.
 
  
 0.583
CEK20346.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; JGI identifier:CP488_02826.
  
     0.548
CEK18256.1
ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; JGI identifier:CP488_02120; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.535
CEK20113.1
Outer membrane cobalamin receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; JGI identifier:CP488_02749.
 
    
0.510
CEK13795.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter; JGI identifier:CP488_00622.
 
  
 0.504
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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