STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K3YVC4_SETITrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (241 aa)    
Predicted Functional Partners:
K3Z402_SETIT
Bms1-type G domain-containing protein.
   
 
 0.951
K3Z3Q4_SETIT
WD_REPEATS_REGION domain-containing protein.
   
 
 0.921
K3YIV5_SETIT
Brix domain-containing protein.
   
   0.916
K4A5G2_SETIT
WD_REPEATS_REGION domain-containing protein.
   
   0.900
K3XV61_SETIT
WD_REPEATS_REGION domain-containing protein.
   
   0.898
K3XLN3_SETIT
KH domain-containing protein.
   
   0.897
K4ABD7_SETIT
Uncharacterized protein.
   
   0.893
K3XZ90_SETIT
PINc domain-containing protein.
   
 
 0.887
K3Y626_SETIT
CBF domain-containing protein.
   
   0.887
A0A368QC81
Uncharacterized protein.
   
 
 0.884
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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