STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si014944mUncharacterized protein (130 aa)    
Predicted Functional Partners:
Si009747m
Uncharacterized protein
      
 0.663
Si002295m
Uncharacterized protein
      
 0.608
Si023194m
Uncharacterized protein
      
 0.578
Si011039m
Chalcone-flavonone isomerase family protein; Belongs to the chalcone isomerase family
      
 0.495
Si035167m
Uncharacterized protein; Belongs to the cytochrome P450 family
      
 0.469
Si038989m
Uncharacterized protein; Belongs to the cytochrome P450 family
      
 0.469
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (8%) [HD]