STRINGSTRING
Si028170m protein (Setaria italica) - STRING interaction network
"Si028170m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si028170mUncharacterized protein (527 aa)    
Predicted Functional Partners:
Si017641m
Uncharacterized protein (354 aa)
     
   
  0.602
Si019578m
Uncharacterized protein (215 aa)
     
   
  0.581
Si029796m
Uncharacterized protein; Belongs to the GRAS family (457 aa)
           
  0.580
Si024219m
Uncharacterized protein (325 aa)
           
  0.578
Si012229m
Uncharacterized protein (228 aa)
           
  0.577
Si032676m
Uncharacterized protein (413 aa)
           
  0.499
Si034954m
Uncharacterized protein; Belongs to the GRAS family (562 aa)
           
  0.499
Si031887m
Uncharacterized protein (132 aa)
           
  0.497
Si015156m
Uncharacterized protein (213 aa)
           
  0.497
Si022981m
Uncharacterized protein (264 aa)
           
  0.491
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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