STRINGSTRING
Si030896m protein (Setaria italica) - STRING interaction network
"Si030896m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si030896mUncharacterized protein (252 aa)    
Predicted Functional Partners:
Si011756m
Uncharacterized protein (389 aa)
     
 
  0.803
Si034602m
Uncharacterized protein (650 aa)
     
 
  0.735
Si036519m
Uncharacterized protein (335 aa)
           
  0.608
Si022663m
Uncharacterized protein (324 aa)
           
  0.608
Si009376m
Uncharacterized protein (808 aa)
       
 
  0.596
Si016558m
Uncharacterized protein (674 aa)
           
  0.590
Si030559m
Uncharacterized protein (318 aa)
           
  0.580
Si036471m
Uncharacterized protein (341 aa)
           
  0.531
Si002372m
Uncharacterized protein (303 aa)
           
  0.531
Si000107m
Uncharacterized protein (1160 aa)
       
 
  0.510
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (9%) [HD]