STRINGSTRING
Si035062m protein (Setaria italica) - STRING interaction network
"Si035062m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si035062mUncharacterized protein (541 aa)    
Predicted Functional Partners:
Si007022m
Uncharacterized protein (292 aa)
           
  0.727
Si022829m
Uncharacterized protein (295 aa)
           
  0.666
Si035336m
Uncharacterized protein (498 aa)
           
  0.663
Si021635m
Uncharacterized protein; Belongs to the GRAS family (561 aa)
     
   
  0.592
Si018161m
Uncharacterized protein (252 aa)
     
 
  0.590
Si034627m
Uncharacterized protein; Belongs to the GRAS family (644 aa)
           
  0.588
Si029686m
Uncharacterized protein (480 aa)
           
  0.588
Si015032m
Uncharacterized protein (148 aa)
           
  0.588
Si012632m
Uncharacterized protein (202 aa)
           
  0.588
Si013151m
Uncharacterized protein (1118 aa)
           
  0.587
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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