STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_00133Ribonuclease 3. (470 aa)    
Predicted Functional Partners:
B9G98_01231
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.869
B9G98_02966
ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family.
  
 0.869
B9G98_04463
54S ribosomal protein L2, mitochondrial.
  
 
 0.859
B9G98_00330
37S ribosomal protein MRP17, mitochondrial.
   
 
 0.854
B9G98_01556
54S ribosomal protein IMG1, mitochondrial.
  
 
 0.853
B9G98_03274
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.850
B9G98_02980
ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family.
  
 0.849
B9G98_00312
54S ribosomal protein L17, mitochondrial.
   
 
 0.847
B9G98_01226
37S ribosomal protein S16, mitochondrial.
  
 
 0.840
B9G98_03010
54S ribosomal protein L32, mitochondrial.
  
   0.838
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.