STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_02248Septation initiation network scaffold protein cdc11. (962 aa)    
Predicted Functional Partners:
B9G98_02424
Cytokinesis protein sepH.
   
 0.966
B9G98_04505
Septum-promoting GTP-binding protein 1.
    
 0.898
B9G98_03460
Uncharacterized protein.
   
 0.888
B9G98_04132
Cell division control protein 16.
    
 
 0.814
B9G98_00207
Elongation factor 1-gamma 1; Belongs to the GST superfamily.
    
 0.780
B9G98_03608
Elongation factor 1-gamma 2.
    
 0.780
B9G98_03946
RING-type domain-containing protein.
    
 0.776
B9G98_02164
Small nuclear ribonucleoprotein Sm D2.
    
 0.747
B9G98_00222
Small nuclear ribonucleoprotein-associated protein B.
    
 0.741
B9G98_03203
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.730
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.