STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
B9G98_02477Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] (395 aa)    
Predicted Functional Partners:
B9G98_03715
Queuine tRNA-ribosyltransferase-like protein.
  
 0.975
B9G98_01924
Thymidylate synthase.
 
 
    0.911
B9G98_02017
Bifunctional protein RIB2.
  
  
 0.615
B9G98_00544
26S proteasome regulatory subunit RPN5.
 
      0.578
B9G98_01393
Methylenetetrahydrofolate dehydrogenase [NAD(+)].
  
 
  0.530
B9G98_03593
Thymidylate kinase.
  
 
 0.510
B9G98_04544
N-(5'-phosphoribosyl)anthranilate isomerase.
     
 0.499
B9G98_02475
tRNA pseudouridine synthase 4.
  
  
 0.474
B9G98_00999
FK506-binding protein.
    
  0.471
B9G98_02067
Peptidylprolyl isomerase.
    
  0.471
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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