STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_02509Nitrogen regulatory protein areA. (623 aa)    
Predicted Functional Partners:
B9G98_00638
Transcription factor of morphogenesis MCM1.
    
 0.875
B9G98_01929
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.827
B9G98_02976
General control protein GCN4.
    
 0.685
B9G98_00122
Histone acetyltransferase GCN5.
    
 0.666
B9G98_01305
Suppressor of ferric uptake 1.
     
0.657
B9G98_00381
Protein arginine N-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.652
B9G98_01940
Homeobox protein HD-3.
    
 0.644
B9G98_03028
TATA-box-binding protein.
    
 0.630
B9G98_01997
GATA type zinc finger protein asd-4.
    
0.617
B9G98_02124
Transcriptional repressor rco-1.
    
 0.604
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.