STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_0335540S ribosomal protein S9-A. (191 aa)    
Predicted Functional Partners:
B9G98_00029
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
B9G98_00039
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.999
B9G98_00152
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
B9G98_00185
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
  0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
B9G98_00276
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
B9G98_00367
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
B9G98_00360
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.999
B9G98_00422
60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family.
  
 
 0.999
B9G98_00547
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
  
 0.999
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.