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Mvol_0030 protein (Methanococcus voltae) - STRING interaction network
"Mvol_0030" - KEGG: thiamine biosynthesis protein ThiI in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Mvol_0030KEGG- thiamine biosynthesis protein ThiI; TIGRFAM- thiamine biosynthesis/tRNA modification protein ThiI; PFAM- Thiamine biosynthesis protein-like; THUMP domain protein; Queuosine synthesis-like (429 aa)    
Predicted Functional Partners:
truB
Probable tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (336 aa)
 
     
  0.692
pus10
tRNA pseudouridine synthase Pus10; Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs (519 aa)
         
  0.642
Mvol_0217
RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type (188 aa)
         
  0.635
tbp
TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (181 aa)
           
  0.632
Mvol_1572
KEGG- tdn-Suden_0026 thiamine biosynthesis protein-ExsB (197 aa)
           
  0.632
trm1
tRNA (guanine(26)-N(2))-dimethyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups (376 aa)
           
  0.632
ADI35691.1
KEGG- gem-GM21_0790 phosphoadenosine phosphosulfate reductase; PFAM- phosphoadenosine phosphosulfate reductase; PUA domain containing protein; SMART- PUA domain containing protein (516 aa)
              0.563
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (184 aa)
         
  0.527
Mvol_1325
PFAM- Pseudouridine synthase I, TruA, alpha/beta domain; KEGG- pnu-Pnuc_0770 tRNA pseudouridine synthase A (271 aa)
 
   
  0.503
Mvol_1633
PFAM- Precorrin-8X methylmutase CbiC/CobH; KEGG- sse-Ssed_2081 precorrin-8X methylmutase (212 aa)
              0.497
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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