• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mvol_0035 protein (Methanococcus voltae) - STRING interaction network
"Mvol_0035" - PFAM: SMC domain protein in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_0035PFAM- SMC domain protein; KEGG- viral A-type inclusion protein (1113 aa)    
Predicted Functional Partners:
mre11
DNA double-strand break repair protein Mre11; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3’-5’ exonuclease activity and single- stranded endonuclease activity; Belongs to the MRE11/RAD32 family (391 aa)
 
 
  0.931
Mvol_0037
PFAM- metallophosphoesterase; KEGG- sun-SUN_0725 DNA double-strand break repair protein (391 aa)
 
 
  0.931
Mvol_0534
TIGRFAM- CRISPR-associated protein, Crm2 family; KEGG- conserved hypothetical protein (580 aa)
     
 
  0.926
radB
DNA repair and recombination protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange (280 aa)
 
 
  0.838
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (322 aa)
   
 
  0.807
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (828 aa)
   
 
  0.769
Mvol_0544
TPR repeat-containing protein; KEGG- hhe-HH1443 putative endonuclease; PFAM- TPR repeat-containing protein; ATPase associated with various cellular activities AAA_5; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide repeat (890 aa)
 
   
  0.756
Mvol_0972
Superfamily I DNA and RNA helicase-like protein; KEGG- rso-RS02993 hypothetical protein (713 aa)
 
 
  0.754
Mvol_1511
KEGG- erg-ERGA_CDS_02520 biotin-protein ligase; TIGRFAM- biotin/acetyl-CoA-carboxylase ligase; PFAM- biotin/lipoate A/B protein ligase (275 aa)
   
   
  0.711
Mvol_0543
PFAM- UvrD/REP helicase; KEGG- bab-bbp540 ATP-dependent DNA helicase Rep (1085 aa)
   
 
  0.706
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
Server load: low (12%) [HD]