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engB protein (Methanococcus voltae) - STRING interaction network
"engB" - Probable GTP-binding protein EngB in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
engBProbable GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation (325 aa)    
Predicted Functional Partners:
Mvol_0837
TIGRFAM- phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG- dat-HRM2_42260 SerB; PFAM- Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3 (232 aa)
         
  0.623
Mvol_0801
PFAM- conserved hypothetical protein; KEGG- dal-Dalk_0015 hypothetical protein (344 aa)
              0.604
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (399 aa)
 
 
  0.540
ksgA
Probable ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (275 aa)
 
   
  0.539
Mvol_0625
PFAM- GTP-binding protein HSR1-related; KEGG- hypothetical protein (472 aa)
 
   
  0.528
Mvol_1325
PFAM- Pseudouridine synthase I, TruA, alpha/beta domain; KEGG- pnu-Pnuc_0770 tRNA pseudouridine synthase A (271 aa)
 
   
  0.488
Mvol_1067
annotation not available (54 aa)
              0.485
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (225 aa)
 
   
  0.471
srp54
Signal recognition particle 54 kDa protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY; Belongs to the GTP-binding SRP family. SRP54 subfamily (450 aa)
 
   
  0.465
Mvol_1254
KEGG- ech-ECH_0914 phosphomethylpyrimidine kinase; PFAM- Phosphomethylpyrimidine kinase type-1; Phosphomethylpyrimidine kinase (558 aa)
              0.461
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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