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eif1a protein (Methanococcus voltae) - STRING interaction network
"eif1a" - Translation initiation factor 1A in Methanococcus voltae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
eif1aTranslation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (104 aa)    
Predicted Functional Partners:
rps13
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement (149 aa)
   
 
  0.999
rps11
30S ribosomal protein S11; Located on the platform of the 30S subunit (124 aa)
 
 
  0.995
rps9
30S ribosomal protein S9; KEGG- hypothetical protein; K02960 small subunit ribosomal protein S16e; TIGRFAM- ribosomal protein S9P; PFAM- ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (134 aa)
 
 
  0.989
Mvol_0151
RIO-like kinase; KEGG- hypothetical protein; K07178 RIO kinase 1; PFAM- RIO-like kinase; SMART- protein of unknown function RIO1 (297 aa)
 
   
  0.988
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (193 aa)
 
 
  0.979
rps17
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (108 aa)
 
 
  0.978
rpl30
50S ribosomal protein L30; KEGG- hypothetical protein; K02937 large subunit ribosomal protein L7e; TIGRFAM- ribosomal protein L30P; PFAM- ribosomal protein L30 (154 aa)
 
   
  0.971
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (194 aa)
 
   
  0.968
rps15
PFAM- Ribosomal S13S15 domain protein; ribosomal protein S15; KEGG- 40S ribosomal protein S13; K02953 small subunit ribosomal protein S13e (151 aa)
 
 
  0.968
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (218 aa)
 
 
  0.965
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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