• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mvol_0153 protein (Methanococcus voltae) - STRING interaction network
"Mvol_0153" - UPF0201 protein Mvol_0153 in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_0153UPF0201 protein Mvol_0153; PFAM- Protein of unknown function DUF54; KEGG- aminopeptidase (predicted); Belongs to the UPF0201 family (154 aa)    
Predicted Functional Partners:
Mvol_0629
Putative HTH-type transcriptional regulatory protein Mvol_0629; KEGG- conserved hypothetical protein; PFAM- helix-turn-helix domain protein; SMART- helix-turn-helix domain protein (340 aa)
 
     
  0.779
cca
CCA-adding enzyme; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate (529 aa)
 
     
  0.720
Mvol_0150
Dephospho-CoA kinase-like protein; KEGG- hypothetical protein (188 aa)
 
          0.701
Mvol_0285
PFAM- Protein of unknown function DUF137; KEGG- bpy-Bphyt_3032 putative exported lipoprotein (259 aa)
 
     
  0.646
trm1
tRNA (guanine(26)-N(2))-dimethyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups (376 aa)
 
          0.633
Mvol_1286
PFAM- Type II secretion system F domain (558 aa)
   
     
  0.633
hjc
Holliday junction resolvase Hjc; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5’-terminal phosphate and a 3’-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family (132 aa)
 
     
  0.628
Mvol_1502
KEGG- nis-NIS_1524 hypothetical protein (215 aa)
              0.601
Mvol_0386
RNA 2’,3’-cyclic phosphodiesterase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (196 aa)
              0.601
Mvol_0758
PFAM- aminotransferase class I and II; KEGG- sat-SYN_00908 aspartate aminotransferase (376 aa)
              0.586
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
Server load: low (12%) [HD]