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ksgA protein (Methanococcus voltae) - STRING interaction network
"ksgA" - Probable ribosomal RNA small subunit methyltransferase A in Methanococcus voltae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
ksgAProbable ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (275 aa)    
Predicted Functional Partners:
Mvol_1415
PFAM- Protein of unknown function UPF0113; KEGG- Ribosome subunit biogenesis protein NIP7 (166 aa)
     
        0.998
Mvol_0348
TIGRFAM- KH domain protein; PFAM- K Homology, type 1, subgroup; KEGG- predicted protein; K06961; SMART- KH domain protein (186 aa)
   
 
  0.977
Mvol_1426
RIO-like kinase; KEGG- predicted protein; K07179 RIO kinase 2; PFAM- RIO-like kinase; RIO2 kinase, winged helix domain protein; SMART- protein of unknown function RIO1 (295 aa)
   
 
  0.967
Mvol_0893
KEGG- hypothetical protein; TIGRFAM- small GTP-binding protein; PFAM- GTP-binding protein HSR1-related; Nucleolar GTP-binding-1 domain protein; Miro domain protein (354 aa)
   
        0.963
Mvol_0174
KEGG- hypothetical protein; TIGRFAM- RNA methylase, NOL1/NOP2/sun family; PFAM- Fmu (Sun) domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (322 aa)
 
  0.960
truB
Probable tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (336 aa)
 
 
  0.951
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hypothetical protein; K02889 large subunit ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (97 aa)
   
   
  0.948
Mvol_1365
PFAM- NMD3 family protein; KEGG- nonsense-mediated mRNA decay protein; K07562 nonsense-mediated mRNA decay protein 3 (377 aa)
     
   
  0.946
Mvol_1206
Probable Brix domain-containing ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome (180 aa)
     
 
  0.945
leuS
Leucine--tRNA ligase; KEGG- similar to leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase; TIGRFAM- leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (1000 aa)
 
 
  0.944
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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