Mvol_0217 protein (Methanococcus voltae) - STRING interaction network

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Mvol_0217

RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type (188 aa)

Predicted Functional Partners:

rps4

0.999

rps11

0.999

rpl5

0.999

rps13

0.998

Mvol_1028

0.998

Mvol_1027

0.998

Mvol_0221

0.998

rpoA2

0.998

rps8

0.998

rps12

0.998

Your Current Organism:

Methanococcus voltae

NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mvol_0217	Mvol_0221	Mvol_0217	Mvol_0221	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	0.998
Mvol_0217	Mvol_1027	Mvol_0217	Mvol_1027	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.998
Mvol_0217	Mvol_1028	Mvol_0217	Mvol_1028	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.998
Mvol_0217	rpl5	Mvol_0217	Mvol_1050	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs	0.999
Mvol_0217	rpoA2	Mvol_0217	Mvol_1026	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.998
Mvol_0217	rps11	Mvol_0217	Mvol_0216	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	30S ribosomal protein S11; Located on the platform of the 30S subunit	0.999
Mvol_0217	rps12	Mvol_0217	Mvol_1023	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits	0.998
Mvol_0217	rps13	Mvol_0217	Mvol_0214	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement	0.998
Mvol_0217	rps4	Mvol_0217	Mvol_0215	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	0.999
Mvol_0217	rps8	Mvol_0217	Mvol_1048	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit	0.998
Mvol_0221	Mvol_0217	Mvol_0221	Mvol_0217	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	0.998
Mvol_0221	Mvol_1027	Mvol_0221	Mvol_1027	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.996
Mvol_0221	Mvol_1028	Mvol_0221	Mvol_1028	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.997
Mvol_0221	rpoA2	Mvol_0221	Mvol_1026	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.996
Mvol_0221	rps11	Mvol_0221	Mvol_0216	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	30S ribosomal protein S11; Located on the platform of the 30S subunit	0.719
Mvol_0221	rps12	Mvol_0221	Mvol_1023	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits	0.720
Mvol_0221	rps13	Mvol_0221	Mvol_0214	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement	0.696
Mvol_0221	rps4	Mvol_0221	Mvol_0215	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	0.787
Mvol_1027	Mvol_0217	Mvol_1027	Mvol_0217	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type	0.998
Mvol_1027	Mvol_0221	Mvol_1027	Mvol_0221	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L	0.996

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