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rpl13 protein (Methanococcus voltae) - STRING interaction network
"rpl13" - 50S ribosomal protein L13 in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rpl1350S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (137 aa)    
Predicted Functional Partners:
rpl18e
PFAM- ribosomal protein L15; KEGG- hypothetical protein; K02883 large subunit ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family (124 aa)
   
 
  0.999
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome (86 aa)
   
 
  0.999
rpl29
50S ribosomal protein L29; KEGG- similar to predicted protein; K02918 large subunit ribosomal protein L35e; TIGRFAM- ribosomal protein L29; PFAM- ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family (69 aa)
   
 
  0.999
rpl14
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (132 aa)
   
 
  0.999
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (194 aa)
 
 
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
 
 
  0.999
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (143 aa)
 
 
  0.999
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA (96 aa)
 
 
  0.999
rpl24
50S ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit (119 aa)
 
 
  0.999
rps9
30S ribosomal protein S9; KEGG- hypothetical protein; K02960 small subunit ribosomal protein S16e; TIGRFAM- ribosomal protein S9P; PFAM- ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (134 aa)
   
 
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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