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rps9 protein (Methanococcus voltae) - STRING interaction network
"rps9" - 30S ribosomal protein S9 in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
rps930S ribosomal protein S9; KEGG- hypothetical protein; K02960 small subunit ribosomal protein S16e; TIGRFAM- ribosomal protein S9P; PFAM- ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (134 aa)    
Predicted Functional Partners:
rpl13
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (137 aa)
   
 
  0.999
rps11
30S ribosomal protein S11; Located on the platform of the 30S subunit (124 aa)
   
 
  0.999
rps4
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (177 aa)
   
 
  0.999
rps13
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement (149 aa)
   
 
  0.999
rps2
30S ribosomal protein S2; KEGG- hypothetical protein; K02998 small subunit ribosomal protein SAe; TIGRFAM- ribosomal protein S2; PFAM- ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family (218 aa)
   
 
  0.999
rps12
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (147 aa)
   
 
  0.999
rps17
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (108 aa)
 
 
  0.999
rps10
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (102 aa)
 
 
  0.999
rpl5
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (181 aa)
 
 
  0.999
rpl10e
KEGG- ribosomal protein L10; K02866 large subunit ribosomal protein L10e; TIGRFAM- ribosomal protein L10.e; PFAM- Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family (173 aa)
 
 
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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