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rpl37e protein (Methanococcus voltae) - STRING interaction network
"rpl37e" - 50S ribosomal protein L37e in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl37e50S ribosomal protein L37e; Binds to the 23S rRNA (62 aa)    
Predicted Functional Partners:
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA (96 aa)
   
 
  0.998
rpl18e
PFAM- ribosomal protein L15; KEGG- hypothetical protein; K02883 large subunit ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family (124 aa)
 
 
  0.997
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C’/D’ sRNAs (117 aa)
 
 
  0.997
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA (93 aa)
     
 
  0.996
rpl14
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (132 aa)
   
 
  0.996
rpl24e
50S ribosomal protein L24e; Binds to the 23S rRNA (63 aa)
   
 
  0.996
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome (86 aa)
   
 
  0.995
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
 
 
  0.994
rpl29
50S ribosomal protein L29; KEGG- similar to predicted protein; K02918 large subunit ribosomal protein L35e; TIGRFAM- ribosomal protein L29; PFAM- ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family (69 aa)
   
 
  0.994
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (241 aa)
   
 
  0.993
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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